Sequence Similarity Clusters for the Entities in PDB 1HY5

Entity #1 | Chains: A,B
YERSINIA PESTIS VIRULENCE PROTEIN YOPE protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44922
95 % 1 1 33766 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 1 32280
70 % 1 1 28797
50 % 1 1 24576
40 % 1 1 21628
30 % 1 1 18315

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.