Sequence Similarity Clusters for the Entities in PDB 1HY5

Entity #1 | Chains: A,B
YERSINIA PESTIS VIRULENCE PROTEIN YOPE protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45880
95 % 1 1 34428 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 1 32880
70 % 1 1 29292
50 % 1 1 24977
40 % 1 1 21979
30 % 1 1 18600

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures