Sequence Similarity Clusters for the Entities in PDB 1HXS

Entity #1 | Chains: 1
GENOME POLYPROTEIN, COAT PROTEIN VP1 protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 2098
95 % 1 25 2145
90 % 1 25 2210
70 % 2 34 1532
50 % 5 40 1337
40 % 14 148 272
30 % 14 148 274
Entity #2 | Chains: 2
GENOME POLYPROTEIN, COAT PROTEIN VP2 protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 29 1330
95 % 1 31 1653
90 % 1 31 1682
70 % 5 46 1104
50 % 13 150 288
40 % 13 150 307
30 % 18 178 165
Entity #3 | Chains: 3
GENOME POLYPROTEIN, COAT PROTEIN VP3 protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 31 1206
95 % 1 31 1658
90 % 1 31 1686
70 % 5 46 1106
50 % 8 114 422
40 % 14 159 254
30 % 19 189 149
Entity #4 | Chains: 4
GENOME POLYPROTEIN, COAT PROTEIN VP4 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 2154
95 % 1 23 2518
90 % 2 31 1711
70 % 5 82 551
50 % 12 116 417
40 % 12 116 456
30 % 12 116 448

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.