Sequence Similarity Clusters for the Entities in PDB 1HXS

Entity #1 | Chains: 1
GENOME POLYPROTEIN, COAT PROTEIN VP1 protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 2138
95 % 1 25 2185
90 % 1 25 2253
70 % 2 34 1563
50 % 5 40 1362
40 % 14 148 281
30 % 14 148 285
Entity #2 | Chains: 2
GENOME POLYPROTEIN, COAT PROTEIN VP2 protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 29 1367
95 % 1 31 1690
90 % 1 31 1718
70 % 5 46 1128
50 % 13 150 299
40 % 13 150 316
30 % 18 178 170
Entity #3 | Chains: 3
GENOME POLYPROTEIN, COAT PROTEIN VP3 protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 31 1245
95 % 1 31 1695
90 % 1 31 1723
70 % 5 46 1130
50 % 8 114 432
40 % 14 159 262
30 % 19 189 152
Entity #4 | Chains: 4
GENOME POLYPROTEIN, COAT PROTEIN VP4 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 2195
95 % 1 23 2573
90 % 2 31 1759
70 % 5 82 571
50 % 12 116 429
40 % 12 116 467
30 % 12 116 457

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.