Sequence Similarity Clusters for the Entities in PDB 1HXS

Entity #1 | Chains: 1
GENOME POLYPROTEIN, COAT PROTEIN VP1 protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 2227
95 % 1 25 2283
90 % 1 25 2347
70 % 2 36 1507
50 % 5 42 1328
40 % 14 155 276
30 % 14 155 284
Entity #2 | Chains: 2
GENOME POLYPROTEIN, COAT PROTEIN VP2 protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 29 1434
95 % 1 31 1764
90 % 1 31 1798
70 % 5 48 1117
50 % 13 157 298
40 % 13 157 313
30 % 19 192 165
Entity #3 | Chains: 3
GENOME POLYPROTEIN, COAT PROTEIN VP3 protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 31 1305
95 % 1 31 1768
90 % 1 31 1801
70 % 5 48 1120
50 % 14 164 242
40 % 14 166 260
30 % 20 205 146
Entity #4 | Chains: 4
GENOME POLYPROTEIN, COAT PROTEIN VP4 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 2292
95 % 1 23 2667
90 % 2 33 1686
70 % 5 87 554
50 % 12 122 427
40 % 12 123 454
30 % 12 123 453

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.