Sequence Similarity Clusters for the Entities in PDB 1HXM

Entity #1 | Chains: A,C,E,G
GAMMA-DELTA T-CELL RECEPTOR protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 20125
95 % 1 1 17581 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 1 17211
70 % 1 1 15981
50 % 3 3 9919
40 % 3 3 8999
30 % 4 5 5108
Entity #2 | Chains: B,D,F,H
GAMMA-DELTA T-CELL RECEPTOR protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 19871
95 % 1 1 17396 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 17035
70 % 1 1 15840
50 % 3 4 7627
40 % 3 4 7017
30 % 4358 5342 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.