Sequence Similarity Clusters for the Entities in PDB 1HXF

Entity #1 | Chains: L
THROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 161 338 45
95 % 161 339 64 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 161 339 67
70 % 161 341 78
50 % 161 341 107
40 % 161 341 131
30 % 161 341 138
Entity #2 | Chains: H
THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 138 290 59
95 % 176 377 40 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.6
PDBFlex
90 % 177 384 40
70 % 177 408 46
50 % 177 408 84
40 % 999 1721 4
30 % 1067 1871 6
Entity #3 | Chains: I
HIRUDIN VARIANT protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures