Sequence Similarity Clusters for the Entities in PDB 1HXE

Entity #1 | Chains: L
THROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 160 335 54
95 % 162 343 69 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 162 343 74
70 % 162 343 89
50 % 162 343 118
40 % 162 343 140
30 % 162 343 151
Entity #2 | Chains: H
THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 158 333 55
95 % 177 379 58 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.6
PDBFlex
90 % 178 386 59
70 % 178 410 52
50 % 178 410 93
40 % 1081 1898 4
30 % 1087 1912 7
Entity #3 | Chains: I
HIRUDIN VARIANT-1 protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures