Sequence Similarity Clusters for the Entities in PDB 1HWP

Entity #1 | Chains: A
EBULIN protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 20781
95 % 3 4 18212 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 4 17838
70 % 3 4 16568
50 % 3 4 14429
40 % 75 79 625
30 % 205 210 214
Entity #2 | Chains: B
EBULIN protein, length: 266 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 20498
95 % 3 4 18020
90 % 3 4 17655
70 % 11 12 5720
50 % 11 12 5396
40 % 44 47 1192
30 % 44 47 1174

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures