Sequence Similarity Clusters for the Entities in PDB 1HWP

Entity #1 | Chains: A
EBULIN protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 21077
95 % 3 4 18453 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 4 18071
70 % 3 4 16770
50 % 3 4 14602
40 % 75 79 632
30 % 205 210 215
Entity #2 | Chains: B
EBULIN protein, length: 266 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 20794
95 % 3 4 18259
90 % 3 4 17886
70 % 11 12 5797
50 % 11 12 5465
40 % 44 47 1206
30 % 44 47 1191

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures