Sequence Similarity Clusters for the Entities in PDB 1HWP

Entity #1 | Chains: A
EBULIN protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 25064
95 % 3 4 19347 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 3 4 18931
70 % 3 4 17556
50 % 3 4 17358
40 % 3 4 15967
30 % 115 119 440
Entity #2 | Chains: B
EBULIN protein, length: 266 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 24647
95 % 3 4 23039 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 3 4 22339
70 % 11 12 6414
50 % 11 12 6127
40 % 46 49 1310
30 % 47 50 1303

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures