Sequence Similarity Clusters for the Entities in PDB 1HWP

Entity #1 | Chains: A
EBULIN protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 19406
95 % 3 4 17702 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 3 4 17266
70 % 3 4 16001
50 % 3 4 14007
40 % 165 170 283
30 % 207 212 229
Entity #2 | Chains: B
EBULIN protein, length: 266 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 20907
95 % 3 4 18871 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 3 4 18361
70 % 11 12 5492
50 % 11 12 5222
40 % 45 48 1197
30 % 45 48 1184

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures