Sequence Similarity Clusters for the Entities in PDB 1HWM

Entity #1 | Chains: A
EBULIN protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 19806
95 % 1 4 17413 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 1 4 17051
70 % 1 4 15855
50 % 1 4 13834
40 % 54 77 617
30 % 180 207 209
Entity #2 | Chains: B
EBULIN protein, length: 266 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 19537
95 % 1 4 17231 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 1 4 16874
70 % 9 12 5475
50 % 9 12 5169
40 % 30 47 1149
30 % 30 47 1128

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.