Sequence Similarity Clusters for the Entities in PDB 1HWM

Entity #1 | Chains: A
EBULIN protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 20114
95 % 1 4 17693 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 1 4 17330
70 % 1 4 16108
50 % 1 4 14048
40 % 54 77 625
30 % 181 208 213
Entity #2 | Chains: B
EBULIN protein, length: 266 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 19843
95 % 1 4 17509 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 1 4 17151
70 % 9 12 5551
50 % 9 12 5241
40 % 30 47 1160
30 % 30 47 1140

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.