Sequence Similarity Clusters for the Entities in PDB 1HVV

Entity #1 | Chains: A,B,C,D
SYNTAXIN 1A protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 20 1221
95 % 8 20 1634 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 1.3
PDBFlex
90 % 8 20 1665
70 % 8 20 1692
50 % 9 21 1558
40 % 9 21 1564
30 % 10 23 1428

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures