Sequence Similarity Clusters for the Entities in PDB 1HVV

Entity #1 | Chains: A,B,C,D
SYNTAXIN 1A protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 20 1172
95 % 8 20 1578 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 1.3
PDBFlex
90 % 8 20 1607
70 % 8 20 1621
50 % 9 21 1504
40 % 9 21 1519
30 % 10 23 1380

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.