Sequence Similarity Clusters for the Entities in PDB 1HVB

Entity #1 | Chains: A
D-ALANYL-D-ALANINE CARBOXYPEPTIDASE protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 15 3734
95 % 7 15 4526 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 7 15 4563
70 % 7 15 4471
50 % 7 15 4297
40 % 7 15 4097
30 % 7 16 3560

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures