Sequence Similarity Clusters for the Entities in PDB 1HVB

Entity #1 | Chains: A
D-ALANYL-D-ALANINE CARBOXYPEPTIDASE protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 15 3451
95 % 7 15 4224 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 7 15 4250
70 % 7 15 4157
50 % 7 15 4031
40 % 7 15 3858
30 % 7 16 3355

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.