Sequence Similarity Clusters for the Entities in PDB 1HUZ

Entity #1 | Chains: C,T
5'-D(*AP*AP*TP*AP*GP*GP*CP*GP*TP*CP*G)-3' dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: D,P
5'-D(P*CP*GP*AP*CP*GP*CP*CP*T)-3' dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A,B
DNA POLYMERASE BETA protein, length: 335 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 5438
95 % 269 315 73 Flexibility: Medium
Max RMSD: 14.0, Avg RMSD: 3.1
PDBFlex
90 % 269 315 76
70 % 269 315 89
50 % 269 315 125
40 % 269 315 143
30 % 372 431 106

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.