Sequence Similarity Clusters for the Entities in PDB 1HUO

Entity #1 | Chains: C,T
5'-D(*AP*AP*TP*AP*GP*GP*CP*GP*TP*CP*G)-3' dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: D,P
5'-D(P*CP*GP*AP*CP*GP*CP*C)-3' dna, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A,B
DNA POLYMERASE BETA protein, length: 335 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 5544
95 % 280 322 72
90 % 280 322 76
70 % 280 322 87
50 % 280 322 125
40 % 280 322 141
30 % 397 452 101

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.