Sequence Similarity Clusters for the Entities in PDB 1HUC

Entity #1 | Chains: A,C
CATHEPSIN B protein, length: 47 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 15769
95 % 1 3 14775 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 1 4 12993
70 % 1 4 12193
50 % 1 4 10888
40 % 1 4 9884
30 % 1 4 8614
Entity #2 | Chains: B,D
CATHEPSIN B protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 15039
95 % 1 3 14132 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 1 3 13859
70 % 1 4 11299
50 % 1 4 10110
40 % 1 4 9163
30 % 1 4 7979

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.