Sequence Similarity Clusters for the Entities in PDB 1HUC

Entity #1 | Chains: A,C
CATHEPSIN B protein, length: 47 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 16042
95 % 1 3 15033 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 1 4 13204
70 % 1 4 12427
50 % 1 4 11086
40 % 1 4 10063
30 % 1 4 8774
Entity #2 | Chains: B,D
CATHEPSIN B protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 15280
95 % 1 3 14360 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 1 3 14091
70 % 1 4 11518
50 % 1 4 10290
40 % 1 4 9330
30 % 1 4 8128

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.