Sequence Similarity Clusters for the Entities in PDB 1HTR

Entity #1 | Chains: P
PROGASTRICSIN (PRO SEGMENT) protein, length: 43 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71128
95 % 1 1 49454
90 % 1 1 46990
70 % 1 1 41323
50 % 1 1 35350
40 % 1 1 31150
30 % 1 1 26341
Entity #2 | Chains: B
GASTRICSIN protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25250
95 % 1 2 21241 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 2.0
PDBFlex
90 % 1 2 20658
70 % 1 2 19051
50 % 2 22 2380
40 % 3 110 251
30 % 477 707 28

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.