Sequence Similarity Clusters for the Entities in PDB 1HTR

Entity #1 | Chains: P
PROGASTRICSIN (PRO SEGMENT) protein, length: 43 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74585
95 % 1 1 51870
90 % 1 1 49194
70 % 1 1 43076
50 % 1 1 36741
40 % 1 1 32347
30 % 1 1 27371
Entity #2 | Chains: B
GASTRICSIN protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26664
95 % 1 2 22418 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 2.0
PDBFlex
90 % 1 2 21772
70 % 1 2 19983
50 % 2 22 2537
40 % 4 127 225
30 % 488 737 30

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures