Sequence Similarity Clusters for the Entities in PDB 1HTR

Entity #1 | Chains: P
PROGASTRICSIN (PRO SEGMENT) protein, length: 43 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47089
95 % 1 1 39123
90 % 1 1 37302
70 % 1 1 33073
50 % 1 1 28096
40 % 1 1 24647
30 % 1 1 20530
Entity #2 | Chains: B
GASTRICSIN protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26717
95 % 1 2 23521 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 2.0
PDBFlex
90 % 1 2 22764
70 % 1 2 20726
50 % 2 22 2713
40 % 4 128 234
30 % 488 738 30

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures