Sequence Similarity Clusters for the Entities in PDB 1HT2

Entity #1 | Chains: A,B,C,D,I,J,K,L
HEAT SHOCK LOCUS HSLV protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 9 902
95 % 4 10 929 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.7
PDBFlex
90 % 4 10 963
70 % 7 16 454
50 % 12 23 336
40 % 12 23 354
30 % 12 23 361
Entity #2 | Chains: E,F,G,H
HEAT SHOCK LOCUS HSLU protein, length: 449 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 11 663
95 % 4 12 856 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 2.0
PDBFlex
90 % 4 12 889
70 % 6 16 588
50 % 6 16 632
40 % 6 16 662
30 % 6 16 658

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.