Sequence Similarity Clusters for the Entities in PDB 1HT1

Entity #1 | Chains: A,B,C,D,V,X,Y,Z
HEAT SHOCK LOCUS HSLV protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 9 934
95 % 3 10 966 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.7
PDBFlex
90 % 3 10 997
70 % 6 16 520
50 % 11 23 376
40 % 11 23 397
30 % 11 23 399
Entity #2 | Chains: E,F,G,I
HEAT SHOCK LOCUS HSLU protein, length: 449 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 11 691
95 % 3 12 902 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 2.0
PDBFlex
90 % 3 12 938
70 % 5 16 609
50 % 5 16 659
40 % 5 16 689
30 % 5 16 683

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures