Sequence Similarity Clusters for the Entities in PDB 1HT1

Entity #1 | Chains: A,B,C,D,V,X,Y,Z
HEAT SHOCK LOCUS HSLV protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 9 923
95 % 3 10 957 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.7
PDBFlex
90 % 3 10 988
70 % 6 16 509
50 % 11 23 368
40 % 11 23 383
30 % 11 23 388
Entity #2 | Chains: E,F,G,I
HEAT SHOCK LOCUS HSLU protein, length: 449 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 11 685
95 % 3 12 894 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 2.0
PDBFlex
90 % 3 12 927
70 % 5 16 600
50 % 5 16 647
40 % 5 16 677
30 % 5 16 669

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures