Sequence Similarity Clusters for the Entities in PDB 1HT1

Entity #1 | Chains: A,B,C,D,V,X,Y,Z
HEAT SHOCK LOCUS HSLV protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 9 907
95 % 3 10 937 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.7
PDBFlex
90 % 3 10 971
70 % 6 16 458
50 % 11 23 343
40 % 11 23 358
30 % 11 23 363
Entity #2 | Chains: E,F,G,I
HEAT SHOCK LOCUS HSLU protein, length: 449 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 11 668
95 % 3 12 871 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 2.0
PDBFlex
90 % 3 12 905
70 % 5 16 589
50 % 5 16 633
40 % 5 16 663
30 % 5 16 658

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.