Sequence Similarity Clusters for the Entities in PDB 1HSH

Entity #1 | Chains: A,B,C,D
HIV-II PROTEASE protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 11 1830
95 % 7 19 1304 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 7 19 1332
70 % 7 26 1111
50 % 441 706 5
40 % 450 716 9
30 % 452 718 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures