Sequence Similarity Clusters for the Entities in PDB 1HSA

Entity #1 | Chains: A,D
CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-B*2705) protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 19 2311
95 % 26 34 1413
90 % 133 189 144
70 % 321 664 7
50 % 322 669 7
40 % 340 717 10
30 % 364 834 15
Entity #2 | Chains: B,E
BETA 2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 300 579 2
95 % 327 622 3
90 % 330 631 4
70 % 390 859 5
50 % 396 879 5
40 % 396 879 9
30 % 396 879 14
Entity #3 | Chains: C,F
MODEL PEPTIDE SEQUENCE - ARAAAAAAA protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.