Sequence Similarity Clusters for the Entities in PDB 1HSA

Entity #1 | Chains: A,D
CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-B*2705) protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 19 2494
95 % 26 34 1510 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 138 201 135
70 % 338 719 6
50 % 339 724 6
40 % 360 775 10
30 % 389 899 15
Entity #2 | Chains: B,E
BETA 2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 316 618 2
95 % 343 662 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 1.0
PDBFlex
90 % 346 671 4
70 % 410 916 4
50 % 418 938 3
40 % 418 938 7
30 % 418 938 12
Entity #3 | Chains: C,F
MODEL PEPTIDE SEQUENCE - ARAAAAAAA protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures