Sequence Similarity Clusters for the Entities in PDB 1HRZ

Entity #1 | Chains: B
DNA (5'-D(*GP*CP*AP*CP*AP*AP*AP*C)-3') dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C
DNA (5'-D(*GP*TP*TP*TP*GP*TP*GP*C)-3') dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
HUMAN SRY protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 48378
95 % 2 2 36153
90 % 2 2 34521
70 % 2 2 30687
50 % 14 14 4664
40 % 15 15 4113
30 % 40 47 1066

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures