Sequence Similarity Clusters for the Entities in PDB 1HRV

Entity #1 | Chains: 1
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP1) protein, length: 289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 26 1700
95 % 21 36 1496 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 21 36 1528
70 % 22 37 1467
50 % 22 37 1525
40 % 141 159 276
30 % 141 159 285
Entity #2 | Chains: 2
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 28 1554
95 % 20 35 1564 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.0
PDBFlex
90 % 21 36 1534
70 % 22 37 1468
50 % 141 159 303
40 % 141 159 315
30 % 174 194 165
Entity #3 | Chains: 3
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 36 1119
95 % 21 36 1509 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.2
PDBFlex
90 % 21 36 1541
70 % 22 37 1470
50 % 150 168 240
40 % 152 170 258
30 % 189 209 148
Entity #4 | Chains: 4
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 20 35 1174
95 % 21 36 1539
90 % 21 36 1571
70 % 72 87 565
50 % 107 122 435
40 % 108 123 463
30 % 108 123 460

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.