Sequence Similarity Clusters for the Entities in PDB 1HRT

Entity #1 | Chains: L
THROMBIN (SMALL SUBUNIT) protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 17 1404
95 % 10 17 1907
90 % 10 17 1956
70 % 10 17 1972
50 % 28 42 814
40 % 28 42 845
30 % 28 42 829
Entity #2 | Chains: H
THROMBIN (LARGE SUBUNIT) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 22 1108
95 % 11 22 1515
90 % 11 22 1543
70 % 340 401 44
50 % 340 401 78
40 % 1419 1635 4
30 % 1533 1777 6
Entity #3 | Chains: I
HIRUDIN protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 23285
95 % 3 7 10368
90 % 3 7 10232
70 % 5 10 6805
50 % 5 10 6296
40 % 5 10 5874
30 % 5 10 5256

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.