Sequence Similarity Clusters for the Entities in PDB 1HRP

Entity #1 | Chains: A
HUMAN CHORIONIC GONADOTROPIN protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 47207
95 % 5 10 4211 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.3
PDBFlex
90 % 5 10 4239
70 % 5 10 4175
50 % 5 10 4021
40 % 5 10 3847
30 % 5 10 3567
Entity #2 | Chains: B
HUMAN CHORIONIC GONADOTROPIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28614
95 % 2 3 23770 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.7
PDBFlex
90 % 2 3 22994
70 % 2 3 20960
50 % 2 3 18150
40 % 2 3 16174
30 % 2 3 13830

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.