Sequence Similarity Clusters for the Entities in PDB 1HRP

Entity #1 | Chains: A
HUMAN CHORIONIC GONADOTROPIN protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 46538
95 % 5 10 4154 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.3
PDBFlex
90 % 5 10 4182
70 % 5 10 4110
50 % 5 10 3965
40 % 5 10 3793
30 % 5 10 3513
Entity #2 | Chains: B
HUMAN CHORIONIC GONADOTROPIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28103
95 % 2 3 23318 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 2.0
PDBFlex
90 % 2 3 22563
70 % 2 3 20633
50 % 2 3 17895
40 % 2 3 15952
30 % 2 3 13642

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.