Sequence Similarity Clusters for the Entities in PDB 1HR8

Entity #1 | Chains: A,C,E,G
MITOCHONDRIAL PROCESSING PEPTIDASE ALPHA SUBUNIT protein, length: 475 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 2903
95 % 3 4 3640
90 % 3 4 3676
70 % 3 4 3627
50 % 3 4 3543
40 % 3 4 3413
30 % 3 4 3200
Entity #2 | Chains: B,D,F,H
MITOCHONDRIAL PROCESSING PEPTIDASE BETA SUBUNIT protein, length: 443 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 4216
95 % 3 4 3659
90 % 3 4 3695
70 % 3 4 3646
50 % 3 4 3559
40 % 3 4 3426
30 % 3 4 3210
Entity #3 | Chains: O,P,Q,R
CYTOCHROME C OXIDASE POLYPEPTIDE IV protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 22920
95 % 1 1 19573
90 % 1 1 19044
70 % 1 1 17577
50 % 1 1 15363
40 % 1 1 13735
30 % 1 1 11790

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.