Sequence Similarity Clusters for the Entities in PDB 1HR7

Entity #1 | Chains: A,C,E,G
MITOCHONDRIAL PROCESSING PEPTIDASE ALPHA SUBUNIT protein, length: 475 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 3293
95 % 2 4 4065 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 2 4 4109
70 % 2 4 4054
50 % 2 4 3937
40 % 2 4 3771
30 % 2 4 3524
Entity #2 | Chains: B,D,F,H
MITOCHONDRIAL PROCESSING PEPTIDASE BETA SUBUNIT protein, length: 443 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 4848
95 % 2 4 4084 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 2 4 4129
70 % 2 4 4073
50 % 2 4 3951
40 % 2 4 3783
30 % 2 4 3533

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures