Sequence Similarity Clusters for the Entities in PDB 1HR6

Entity #1 | Chains: A,C,E,G
MITOCHONDRIAL PROCESSING PEPTIDASE ALPHA SUBUNIT protein, length: 475 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 3245
95 % 1 4 4001 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 1 4 4040
70 % 1 4 3994
50 % 1 4 3876
40 % 1 4 3722
30 % 1 4 3478
Entity #2 | Chains: B,D,F,H
MITOCHONDRIAL PROCESSING PEPTIDASE BETA SUBUNIT protein, length: 443 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 18004
95 % 1 4 4022 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 4 4061
70 % 1 4 4014
50 % 1 4 3891
40 % 1 4 3735
30 % 1 4 3487

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures