Sequence Similarity Clusters for the Entities in PDB 1HR6

Entity #1 | Chains: A,C,E,G
MITOCHONDRIAL PROCESSING PEPTIDASE ALPHA SUBUNIT protein, length: 475 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 3745
95 % 1 4 4111 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 1 4 4157
70 % 1 4 4086
50 % 1 4 3969
40 % 1 4 3766
30 % 1 4 3445
Entity #2 | Chains: B,D,F,H
MITOCHONDRIAL PROCESSING PEPTIDASE BETA SUBUNIT protein, length: 443 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 4110
95 % 1 4 4452 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 4 4495
70 % 1 4 4393
50 % 1 4 4232
40 % 1 4 4003
30 % 1 4 3634

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures