Sequence Similarity Clusters for the Entities in PDB 1HQY

Entity #1 | Chains: A,B,C,D
HEAT SHOCK LOCUS HSLV protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 9 910
95 % 7 10 939 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.7
PDBFlex
90 % 7 10 972
70 % 11 16 486
50 % 17 23 361
40 % 17 23 377
30 % 17 23 377
Entity #2 | Chains: E,F
HEAT SHOCK LOCUS HSLU protein, length: 449 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 11 672
95 % 6 12 875 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 2.0
PDBFlex
90 % 6 12 908
70 % 8 16 591
50 % 8 16 636
40 % 8 16 666
30 % 8 16 661

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures