Sequence Similarity Clusters for the Entities in PDB 1HQY

Entity #1 | Chains: A,B,C,D
HEAT SHOCK LOCUS HSLV protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 9 890
95 % 7 10 921 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.7
PDBFlex
90 % 7 10 953
70 % 11 16 448
50 % 17 23 329
40 % 17 23 350
30 % 17 23 357
Entity #2 | Chains: E,F
HEAT SHOCK LOCUS HSLU protein, length: 449 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 11 657
95 % 6 12 849 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 2.1
PDBFlex
90 % 6 12 881
70 % 8 16 582
50 % 8 16 628
40 % 8 16 657
30 % 8 16 653

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.