Sequence Similarity Clusters for the Entities in PDB 1HQW

Entity #1 | Chains: A
CONCANAVALIN A protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 35 60 189
95 % 54 87 147 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.7
PDBFlex
90 % 54 92 154
70 % 70 116 144
50 % 70 116 174
40 % 70 116 189
30 % 70 116 201
Entity #2 | Chains: B
YPY protein, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures