Sequence Similarity Clusters for the Entities in PDB 1HQQ

Entity #1 | Chains: A,B,C,D
STREPTAVIDIN protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 71 95 112
95 % 100 142 68
90 % 103 145 72
70 % 103 145 82
50 % 103 146 107
40 % 103 146 132
30 % 128 199 78
Entity #2 | Chains: E,F,G,H
MP-2 protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.