Sequence Similarity Clusters for the Entities in PDB 1HQQ

Entity #1 | Chains: A,B,C,D
STREPTAVIDIN protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 72 96 117
95 % 102 144 72 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.3
PDBFlex
90 % 105 147 72
70 % 105 147 87
50 % 105 148 115
40 % 105 148 138
30 % 130 202 98
Entity #2 | Chains: E,F,G,H
MP-2 protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures