Sequence Similarity Clusters for the Entities in PDB 1HQQ

Entity #1 | Chains: A,B,C,D
STREPTAVIDIN protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 69 93 102
95 % 98 140 66
90 % 101 143 70
70 % 101 143 79
50 % 101 144 104
40 % 101 144 130
30 % 126 196 75
Entity #2 | Chains: E,F,G,H
MP-2 protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.