Sequence Similarity Clusters for the Entities in PDB 1HQN

Entity #1 | Chains: A,B,C
MAJOR CAPSID PROTEIN protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 9 430
95 % 3 9 600 Flexibility: Low
Max RMSD: 5.4, Avg RMSD: 1.4
PDBFlex
90 % 3 9 626
70 % 3 9 669
50 % 3 9 715
40 % 3 9 744
30 % 3 9 742

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures