Sequence Similarity Clusters for the Entities in PDB 1HQE

Entity #1 | Chains: A
POL POLYPROTEIN protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 16809
95 % 157 248 89 Flexibility: Medium
Max RMSD: 23.3, Avg RMSD: 3.9
PDBFlex
90 % 157 248 94
70 % 157 248 113
50 % 158 249 149
40 % 158 249 164
30 % 158 249 180
Entity #2 | Chains: B
POL POLYPROTEIN protein, length: 430 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 17666
95 % 152 242 113 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.5
PDBFlex
90 % 152 242 117
70 % 152 242 133
50 % 153 243 156
40 % 153 243 175
30 % 153 243 188

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1HQU 2 B POL POLYPROTEIN P51 SUBUNIT 11676 2.7.7.49 | Details
2 1HQE 2 B POL POLYPROTEIN P51 SUBUNIT 11676 2.7.7.49 | Details
3 1SV5 2 B Reverse Transcriptase P51 SUBUNIT 11676 2.7.7.49 | Details
4 1HPZ 2 B POL POLYPROTEIN P51 SUBUNIT 11676 2.7.7.49 | Details