Sequence Similarity Clusters for the Entities in PDB 1HQE

Entity #1 | Chains: A
POL POLYPROTEIN protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 17230
95 % 163 255 92 Flexibility: Medium
Max RMSD: 23.3, Avg RMSD: 3.9
PDBFlex
90 % 163 255 96
70 % 163 255 113
50 % 164 256 151
40 % 164 257 164
30 % 164 257 176
Entity #2 | Chains: B
POL POLYPROTEIN protein, length: 430 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 18113
95 % 158 249 116 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.5
PDBFlex
90 % 158 249 120
70 % 158 249 135
50 % 159 251 160
40 % 159 251 175
30 % 159 251 187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1HQU 2 B POL POLYPROTEIN P51 SUBUNIT 11676 2.7.7.49 | Details
2 1HQE 2 B POL POLYPROTEIN P51 SUBUNIT 11676 2.7.7.49 | Details
3 1SV5 2 B Reverse Transcriptase P51 SUBUNIT 11676 2.7.7.49 | Details
4 1HPZ 2 B POL POLYPROTEIN P51 SUBUNIT 11676 2.7.7.49 | Details