Sequence Similarity Clusters for the Entities in PDB 1HQE

Entity #1 | Chains: A
POL POLYPROTEIN protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 59 107 261
95 % 184 277 88 Flexibility: Medium
Max RMSD: 23.5, Avg RMSD: 3.9
PDBFlex
90 % 184 277 92
70 % 184 277 107
50 % 185 278 144
40 % 185 279 156
30 % 185 279 173
Entity #2 | Chains: B
POL POLYPROTEIN protein, length: 430 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 74 130 207
95 % 179 271 109 Flexibility: Low
Max RMSD: 13.7, Avg RMSD: 1.5
PDBFlex
90 % 179 271 115
70 % 179 271 126
50 % 180 273 152
40 % 180 273 167
30 % 180 273 182

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures