Sequence Similarity Clusters for the Entities in PDB 1HQE

Entity #1 | Chains: A
POL POLYPROTEIN protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 59 107 264
95 % 185 278 108 Flexibility: Medium
Max RMSD: 23.5, Avg RMSD: 3.9
PDBFlex
90 % 185 278 113
70 % 185 278 128
50 % 186 279 153
40 % 186 280 162
30 % 186 280 181
Entity #2 | Chains: B
POL POLYPROTEIN protein, length: 430 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 74 130 210
95 % 180 272 112 Flexibility: Low
Max RMSD: 13.7, Avg RMSD: 1.5
PDBFlex
90 % 180 272 117
70 % 180 272 131
50 % 181 274 159
40 % 181 274 170
30 % 181 274 187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures