Sequence Similarity Clusters for the Entities in PDB 1HQD

Entity #1 | Chains: A
LIPASE protein, length: 320 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 7129
95 % 8 9 6351 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 8 9 6334
70 % 10 12 3510
50 % 10 12 3421
40 % 13 17 2630
30 % 13 17 2479

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures