Sequence Similarity Clusters for the Entities in PDB 1HQ6

Entity #1 | Chains: A,C
HISTIDINE DECARBOXYLASE protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 3601
95 % 4 6 3956 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.6
PDBFlex
90 % 4 6 4012
70 % 4 6 3935
50 % 4 6 3832
40 % 4 6 3645
30 % 4 6 3337
Entity #2 | Chains: B,D
HISTIDINE DECARBOXYLASE protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 3645
95 % 4 6 3858 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 4 6 4060
70 % 4 6 3933
50 % 4 6 3828
40 % 4 6 3638
30 % 4 6 3334

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures