Sequence Similarity Clusters for the Entities in PDB 1HQ3

Entity #1 | Chains: A,E
HISTONE H2A-IV protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 5244
95 % 10 125 111
90 % 10 134 107
70 % 11 140 97
50 % 12 150 123
40 % 12 150 140
30 % 12 150 154
Entity #2 | Chains: B,F
HISTONE H2B protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 6698
95 % 10 124 115
90 % 10 127 116
70 % 10 134 123
50 % 10 134 151
40 % 10 134 166
30 % 10 134 183
Entity #3 | Chains: C,G
HISTONE H3 protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 17 1182
95 % 15 137 105
90 % 15 140 105
70 % 15 141 116
50 % 15 144 139
40 % 15 144 156
30 % 15 144 173
Entity #4 | Chains: D,H
HISTONE H4-VI protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 128 85
95 % 15 147 76
90 % 15 152 74
70 % 15 152 88
50 % 15 152 127
40 % 15 152 145
30 % 15 152 159

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.