Sequence Similarity Clusters for the Entities in PDB 1HQ3

Entity #1 | Chains: A,E
HISTONE H2A-IV protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 5721
95 % 10 141 81
90 % 10 149 79
70 % 11 155 89
50 % 12 165 116
40 % 12 165 138
30 % 12 165 150
Entity #2 | Chains: B,F
HISTONE H2B protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 7298
95 % 10 136 108
90 % 10 141 91
70 % 10 148 100
50 % 10 148 139
40 % 10 148 156
30 % 10 148 172
Entity #3 | Chains: C,G
HISTONE H3 protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 19 1138
95 % 15 151 76
90 % 15 154 78
70 % 15 155 93
50 % 15 158 128
40 % 15 158 145
30 % 15 158 160
Entity #4 | Chains: D,H
HISTONE H4-VI protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 142 62
95 % 15 161 74
90 % 15 166 73
70 % 15 166 86
50 % 15 166 122
40 % 15 166 140
30 % 15 166 154

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.