Sequence Similarity Clusters for the Entities in PDB 1HPZ

Entity #1 | Chains: A
POL POLYPROTEIN protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 91 107 292
95 % 251 280 109 Flexibility: Medium
Max RMSD: 23.5, Avg RMSD: 3.7
PDBFlex
90 % 251 280 116
70 % 251 280 133
50 % 252 281 155
40 % 253 282 166
30 % 253 282 186
Entity #2 | Chains: B
POL POLYPROTEIN protein, length: 430 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 113 130 215
95 % 246 274 115 Flexibility: Low
Max RMSD: 13.7, Avg RMSD: 1.5
PDBFlex
90 % 246 274 122
70 % 246 274 137
50 % 248 276 164
40 % 248 276 175
30 % 248 276 194

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures