Sequence Similarity Clusters for the Entities in PDB 1HPB

Entity #1 | Chains: P
HISTIDINE-BINDING PROTEIN protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 29314
95 % 2 3 17809 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 2 3 17374
70 % 9 10 6404
50 % 9 10 5968
40 % 9 10 5555
30 % 75 82 389

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4KQP 1 A Glutamine ABC transporter permease and substrate binding protein protein SUBSTRATE BINDING DOMAIN 2, UNP residues 255-484 1358
2 4I62 1 A Amino acid ABC transporter, periplasmic amino acid-binding protein, putative 1313
3 2YLN 1 A PUTATIVE ABC TRANSPORTER, PERIPLASMIC BINDING PROTEIN, AMINO ACID RESIDUES 17-275 485
4 6FT2 1 A Lysine/arginine/ornithine-binding periplasmic protein 28901
5 4LA9 1 A, B Glutamine ABC transporter permease and substrate binding protein protein SUBSTRATE BINDING DOMAIN 1, UNP residues 1-251 1358
6 4OHN 1 A ABC transporter substrate-binding protein 1313
7 4ZEF 1 A Amino acid ABC transporter amino acid-binding/permease residues 266-497 1351
8 4GVO 1 A, B Lmo2349 protein 1639
9 4KPT 1 A, B Glutamine ABC transporter permease and substrate binding protein protein SUBSTRATE BINDING DOMAIN 1, UNP residues 1-251 1358
10 4G4P 1 A Amino acid ABC transporter, amino acid-binding/permease protein 1351
11 4EQ9 1 A ABC transporter substrate-binding protein-amino acid transport UNP residues 34-276 1313
12 4PRS 1 A, B ABC-type transporter, periplasmic subunit family 3 2336
13 4KR5 1 A, B Glutamine ABC transporter permease and substrate binding protein protein SUBSTRATE BINDING DOMAIN 2 1358
14 4YMX 1 A, B ABC-type amino acid transport system, periplasmic component 911092
15 4ZV2 1 A AncQR 32630
16 5EYF 1 A, B Glutamate ABC superfamily ATP binding cassette transporter, binding protein 1352
17 2V25 1 A, B MAJOR CELL-BINDING FACTOR 197
18 4C0R 1 A, B PUTATIVE AMINO ACID BINDING PROTEIN 1309
19 4ZV1 1 A AncQR 32630
20 5LOM 1 A, B Deoxyfructosyl-amino Acid Transporter Periplasmic Binding Protein UNP residues 36-278 1176649
21 4POW 1 A, B Nopaline-binding periplasmic protein UNP RESIDUES 26-283 1176649
22 4PP0 1 A, B Nopaline-binding periplasmic protein UNP RESIDUES 26-283 1176649
23 3TQL 1 A Arginine-binding protein 777
24 5WJP 1 A Cyclohexadienyl dehydratase UNP RESIDUES 19-255 198252
25 4OEN 1 A, B Second substrate binding domain of putative amino acid ABC transporter 1313
26 3KBR 1 A Cyclohexadienyl dehydratase 287 4.2.1.51 | Details 4.2.1.91 | Details
27 4H5G 1 A, B Amino acid ABC superfamily ATP binding cassette transporter, binding protein 1313
28 1LST 1 A LYSINE, ARGININE, ORNITHINE-BINDING PROTEIN 90371
29 2PVU 1 A ArtJ 1422
30 1II5 1 A Slr1257 protein GluR0 ligand binding core, residues 44-140, 256-385 1148
31 2Q2A 1 A, B, C, D ArtJ 1422
32 5ITP 1 A, B Nopaline-binding periplasmic protein 358
33 4H5F 1 A, B, C, D Amino acid ABC superfamily ATP binding cassette transporter, binding protein 1313
34 5L9M 1 A Deoxyfructosyl-amino Acid Transporter Periplasmic Binding Protein 1176649
35 3VV5 1 A, B Amino acid ABC transporter, binding protein UNP residues 19-254 274
36 3VVF 1 A, B Amino acid ABC transporter, binding protein UNP residues 19-254 274
37 5OWF 1 A Lysine/arginine/ornithine-binding periplasmic protein 28901
38 1HSL 1 A, B HISTIDINE-BINDING PROTEIN 562
39 2LAO 1 A LYSINE, ARGININE, ORNITHINE-BINDING PROTEIN 90371
40 1LAH 1 E LYSINE, ARGININE, ORNITHINE-BINDING PROTEIN 90371
41 2Y7I 1 A, B STM4351 RESIDUES 18-246 28901
42 5KKW 1 A Cyclohexadienyl dehydratase residues 19-255 198252
43 3DEL 1 B, C, D, F Arginine Binding Protein CT381 813
44 5L9O 1 A, B Deoxyfructosyl-amino Acid Transporter Periplasmic Binding Protein 1176649
45 1LAF 1 E LYSINE, ARGININE, ORNITHINE-BINDING PROTEIN 90371
46 1LAG 1 E LYSINE, ARGININE, ORNITHINE-BINDING PROTEIN 90371
47 4P0I 1 A, B Nopaline-binding periplasmic protein UNP residues 26-283 1176649
48 1WDN 1 A GLUTAMINE BINDING PROTEIN LIGANDED CLOSE-CLEFT FORM 562
49 1IIT 1 A Slr1257 protein GLUR0 LIGAND BINDING CORE, RESIDUES 44-140, 256-385 1148
50 1IIW 1 A Slr1257 protein GLUR0 LIGAND BINDING CORE, RESIDUES 44-140, 256-385 1148
51 5HPQ 1 A Cyclohexadienyl dehydratase UNP residues 26-268 287 4.2.1.51 | Details 4.2.1.91 | Details
52 5ORG 1 A, B Octopine-binding periplasmic protein 358
53 3HV1 1 A, B Polar amino acid ABC uptake transporter substrate binding protein residues 27-283 1308
54 3I6V 1 A periplasmic His/Glu/Gln/Arg/opine family-binding protein sequence database residues 50-270 89184
55 5JOS 1 A Cyclohexadienyl dehydratase 32630 4.2.1.51 | Details 4.2.1.91 | Details
56 5OTA 1 A, B Nopaline-binding periplasmic protein HHHHHH : Tag 1176649
57 5UH0 1 A, B Membrane-bound lytic murein transglycosylase F UNP residues 35-274 632 4.2.2 | Details
58 3VVE 1 A, B Amino acid ABC transporter, binding protein UNP residues 19-254 274
59 3VVD 1 A, B Amino acid ABC transporter, binding protein UNP residues 19-254 274
60 3N26 1 A Amino acid ABC transporter, periplasmic amino acid-binding protein Soluble domain (UNP residues 23-259) 83558
61 2O1M 1 A, B Probable amino-acid ABC transporter extracellular-binding protein ytmK 1423
62 3KZG 1 A, B, C, D Arginine 3rd transport system periplasmic binding protein sequence database residues 18-245 446
63 5OTC 1 A, B Nopaline-binding periplasmic protein HHHHHH : Tag 1176649
64 2YJP 1 A, B, C PUTATIVE ABC TRANSPORTER, PERIPLASMIC BINDING PROTEIN, AMINO ACID RESIDUES 18-284 485
65 5ITO 1 A, B Nopaline-binding periplasmic protein 1176649
66 4POX 1 A, B Nopaline-binding periplasmic protein UNP RESIDUES 26-283 1176649
67 5OT8 1 A, B Nopaline-binding periplasmic protein HHHHHH : Tag 1176649
68 4F3P 1 A, B Glutamine-binding periplasmic protein unp residues 25-250 28450
69 2PYY 1 A, B, C Ionotropic glutamate receptor bacterial homologue 272131
70 1GGG 1 A, B GLUTAMINE BINDING PROTEIN THIS ENTRY REPRESENTS THE OPEN LIGAND FREE STRUCTURE 562
71 5ORE 1 A Octopine-binding periplasmic protein 358
72 5OT9 1 A, B Nopaline-binding periplasmic protein HHHHHH : Tag 1176649
73 4PSH 1 A, B ABC-type transporter, periplasmic subunit family 3 2336
74 3ZSF 1 A, B, C, D, E, F, G, H ABC TRANSPORTER, PERIPLASMIC BINDING PROTEIN, AMINO ACID 485
75 1HPB 1 P HISTIDINE-BINDING PROTEIN 90371
76 3H7M 1 A Sensor protein 35554 2.7.13.3 | Details
77 3K4U 1 A, B, C, D, E, F BINDING COMPONENT OF ABC TRANSPORTER 844
78 2Q2C 1 A, B, C, D ArtJ 1422
79 5T0W 1 A, B, C, D AncCDT-1 32630
80 6BQE 1 A, B, C Arogenate dehydratase 287
81 5TUJ 1 C Ancestral protein CDT-Anc1 32644
82 2M8C 1 A Cationic amino acid ABC transporter, periplasmic binding protein 562