Sequence Similarity Clusters for the Entities in PDB 1HP4

Entity #1 | Chains: A
BETA-N-ACETYLHEXOSAMINIDASE protein, length: 512 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 8 8545
95 % 7 8 8583 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 10 11 5565
70 % 10 11 5454
50 % 10 11 5195
40 % 19 20 2905
30 % 19 21 2564

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures