Sequence Similarity Clusters for the Entities in PDB 1HOW

Entity #1 | Chains: A
SERINE/THREONINE-PROTEIN KINASE YMR216C protein, length: 373 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26503
95 % 2 6 6415 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 2 6 6406
70 % 2 6 6247
50 % 2 6 5842
40 % 6 14 2768
30 % 1700 3966 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures