Sequence Similarity Clusters for the Entities in PDB 1HOW

Entity #1 | Chains: A
SERINE/THREONINE-PROTEIN KINASE YMR216C protein, length: 373 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26859
95 % 2 6 6502 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 2 6 6501
70 % 2 6 6334
50 % 2 6 5916
40 % 6 15 2687
30 % 1784 4073 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures