Sequence Similarity Clusters for the Entities in PDB 1HOC

Entity #1 | Chains: A
CLASS I HISTOCOMPATIBILITY ANTIGEN (H2-DB) (ALPHA CHAIN) protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 55 207
95 % 21 59 269
90 % 22 61 276
70 % 429 692 6
50 % 430 697 6
40 % 463 748 10
30 % 501 868 15
Entity #2 | Chains: B
BETA 2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 68 133 95
95 % 100 217 64
90 % 100 217 68
70 % 524 885 4
50 % 536 907 3
40 % 536 907 9
30 % 536 907 14
Entity #3 | Chains: C
9-RESIDUE PEPTIDE protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.