Sequence Similarity Clusters for the Entities in PDB 1HOC

Entity #1 | Chains: A
CLASS I HISTOCOMPATIBILITY ANTIGEN (H2-DB) (ALPHA CHAIN) protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 63 200
95 % 26 67 252
90 % 27 69 265
70 % 448 727 6
50 % 449 732 6
40 % 482 783 10
30 % 523 907 15
Entity #2 | Chains: B
BETA 2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 68 135 96
95 % 106 228 63
90 % 106 228 67
70 % 543 922 4
50 % 555 944 3
40 % 555 944 7
30 % 555 944 12
Entity #3 | Chains: C
9-RESIDUE PEPTIDE protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures