Sequence Similarity Clusters for the Entities in PDB 1HOC

Entity #1 | Chains: A
CLASS I HISTOCOMPATIBILITY ANTIGEN (H2-DB) (ALPHA CHAIN) protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 44 237
95 % 18 48 319
90 % 19 50 335
70 % 383 608 7
50 % 384 613 7
40 % 408 653 11
30 % 441 766 13
Entity #2 | Chains: B
BETA 2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 68 131 84
95 % 96 208 60
90 % 96 208 63
70 % 468 794 5
50 % 477 812 5
40 % 477 812 9
30 % 477 812 12
Entity #3 | Chains: C
9-RESIDUE PEPTIDE protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.