Sequence Similarity Clusters for the Entities in PDB 1HOC

Entity #1 | Chains: A
CLASS I HISTOCOMPATIBILITY ANTIGEN (H2-DB) (ALPHA CHAIN) protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 44 238
95 % 18 48 326
90 % 19 50 341
70 % 391 618 7
50 % 392 623 7
40 % 416 663 11
30 % 449 776 13
Entity #2 | Chains: B
BETA 2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 68 131 86
95 % 97 210 60
90 % 97 210 63
70 % 479 807 5
50 % 488 825 5
40 % 488 825 9
30 % 488 825 12
Entity #3 | Chains: C
9-RESIDUE PEPTIDE protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.