Sequence Similarity Clusters for the Entities in PDB 1HO8

Entity #1 | Chains: A
VACUOLAR ATP SYNTHASE SUBUNIT H protein, length: 480 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 5818
95 % 1 9 6453 Flexibility: Medium
Max RMSD: 15.7, Avg RMSD: 6.4
PDBFlex
90 % 1 9 6453
70 % 1 9 6289
50 % 1 9 5872
40 % 1 9 5511
30 % 1 9 4943

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures