Sequence Similarity Clusters for the Entities in PDB 1HO8

Entity #1 | Chains: A
VACUOLAR ATP SYNTHASE SUBUNIT H protein, length: 480 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 7038
95 % 1 9 7179 Flexibility: Medium
Max RMSD: 15.7, Avg RMSD: 6.4
PDBFlex
90 % 1 9 7144
70 % 1 9 6908
50 % 1 9 6394
40 % 1 9 5925
30 % 1 9 5207

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures