Sequence Similarity Clusters for the Entities in PDB 1HNX

Entity #1 | Chains: A
16S RIBOSOMAL RNA rna, length: 1522 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: I
30S RIBOSOMAL PROTEIN S9 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 52 91 198
95 % 190 256 46
90 % 190 256 51
70 % 190 256 60
50 % 218 356 36
40 % 218 356 46
30 % 240 433 40
Entity #11 | Chains: J
30S RIBOSOMAL PROTEIN S10 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 189 254 36
95 % 190 255 49
90 % 190 255 54
70 % 190 255 64
50 % 224 362 28
40 % 224 362 38
30 % 246 436 36
Entity #12 | Chains: K
30S RIBOSOMAL PROTEIN S11 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 190 256 34
95 % 190 256 45
90 % 190 256 50
70 % 190 256 59
50 % 218 356 35
40 % 242 438 20
30 % 242 439 34
Entity #13 | Chains: L
30S RIBOSOMAL PROTEIN S12 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 136 208 46
95 % 190 263 36
90 % 190 263 41
70 % 218 367 22
50 % 218 368 27
40 % 218 368 37
30 % 218 368 57
Entity #14 | Chains: M
30S RIBOSOMAL PROTEIN S13 protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 190 257 32
95 % 190 257 43
90 % 190 257 48
70 % 190 257 57
50 % 221 361 32
40 % 221 361 43
30 % 243 437 39
Entity #15 | Chains: N
30S RIBOSOMAL PROTEIN S14 protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 190 255 35
95 % 190 255 50
90 % 190 255 55
70 % 190 256 62
50 % 190 256 88
40 % 190 256 108
30 % 190 256 120
Entity #16 | Chains: O
30S RIBOSOMAL PROTEIN S15 protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 190 259 29
95 % 194 264 35
90 % 194 264 40
70 % 194 264 50
50 % 225 369 26
40 % 225 370 36
30 % 225 370 56
Entity #17 | Chains: P
30S RIBOSOMAL PROTEIN S16 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 190 251 37
95 % 190 256 47
90 % 190 256 52
70 % 190 256 61
50 % 190 256 87
40 % 190 257 107
30 % 221 359 63
Entity #18 | Chains: Q
30S RIBOSOMAL PROTEIN S17 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 49 87 225
95 % 189 250 51
90 % 190 254 56
70 % 190 254 66
50 % 190 254 90
40 % 190 254 111
30 % 190 254 123
Entity #19 | Chains: R
30S RIBOSOMAL PROTEIN S18 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 27 51 616
95 % 172 221 64
90 % 172 221 69
70 % 172 221 79
50 % 172 221 111
40 % 172 221 132
30 % 172 221 143
Entity #2 | Chains: X
FRAGMENT OF MESSENGER RNA rna, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #20 | Chains: S
30S RIBOSOMAL PROTEIN S19 protein, length: 93 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 191 259 27
95 % 191 259 38
90 % 191 259 44
70 % 191 259 53
50 % 219 359 31
40 % 219 359 41
30 % 219 359 59
Entity #21 | Chains: T
30S RIBOSOMAL PROTEIN S20 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 22 51 384
95 % 190 255 48
90 % 190 255 53
70 % 190 255 63
50 % 190 255 89
40 % 190 255 110
30 % 190 255 122
Entity #22 | Chains: V
30S RIBOSOMAL PROTEIN THX protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 190 246 39
95 % 190 246 54
90 % 190 246 59
70 % 190 246 69
50 % 190 246 95
40 % 190 246 118
30 % 190 246 131
Entity #3 | Chains: B
30S RIBOSOMAL PROTEIN S2 protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 190 256 30
95 % 190 257 39
90 % 190 257 45
70 % 190 257 54
50 % 218 355 34
40 % 218 356 44
30 % 218 356 62
Entity #4 | Chains: C
30S RIBOSOMAL PROTEIN S3 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 172 220 45
95 % 172 220 65
90 % 172 220 70
70 % 172 220 80
50 % 178 276 78
40 % 178 276 100
30 % 178 276 112
Entity #5 | Chains: D
30S RIBOSOMAL PROTEIN S4 protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 188 249 38
95 % 190 257 40
90 % 190 257 46
70 % 190 257 55
50 % 218 356 33
40 % 218 357 42
30 % 218 357 61
Entity #6 | Chains: E
30S RIBOSOMAL PROTEIN S5 protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 190 256 33
95 % 190 256 44
90 % 190 256 49
70 % 190 256 58
50 % 219 360 30
40 % 219 360 40
30 % 219 362 58
Entity #7 | Chains: F
30S RIBOSOMAL PROTEIN S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 192 261 25
95 % 198 267 34
90 % 198 267 37
70 % 198 267 46
50 % 198 267 84
40 % 198 267 103
30 % 222 313 77
Entity #8 | Chains: G
30S RIBOSOMAL PROTEIN S7 protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 191 260 26
95 % 191 261 37
90 % 191 261 42
70 % 191 261 51
50 % 218 313 54
40 % 218 314 68
30 % 218 314 89
Entity #9 | Chains: H
30S RIBOSOMAL PROTEIN S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 190 256 31
95 % 190 256 42
90 % 191 260 43
70 % 191 260 52
50 % 221 362 29
40 % 222 364 39
30 % 246 443 33

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.