Sequence Similarity Clusters for the Entities in PDB 1HNX

Entity #1 | Chains: A
16S RIBOSOMAL RNA rna, length: 1522 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: I
30S RIBOSOMAL PROTEIN S9 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 52 91 204
95 % 193 269 48
90 % 193 269 51
70 % 193 269 61
50 % 221 389 35
40 % 221 389 45
30 % 247 492 34
Entity #11 | Chains: J
30S RIBOSOMAL PROTEIN S10 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 192 267 37
95 % 193 268 51
90 % 193 268 54
70 % 193 268 65
50 % 227 395 25
40 % 227 395 37
30 % 253 494 30
Entity #12 | Chains: K
30S RIBOSOMAL PROTEIN S11 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 193 269 35
95 % 193 269 47
90 % 193 269 50
70 % 193 269 60
50 % 221 389 34
40 % 249 491 18
30 % 249 491 31
Entity #13 | Chains: L
30S RIBOSOMAL PROTEIN S12 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 136 217 48
95 % 193 276 36
90 % 193 276 40
70 % 221 402 20
50 % 221 407 23
40 % 221 407 33
30 % 221 407 54
Entity #14 | Chains: M
30S RIBOSOMAL PROTEIN S13 protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 193 270 33
95 % 193 270 44
90 % 193 270 48
70 % 193 270 57
50 % 224 394 31
40 % 224 394 43
30 % 250 495 33
Entity #15 | Chains: N
30S RIBOSOMAL PROTEIN S14 protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 193 268 36
95 % 193 268 52
90 % 193 268 55
70 % 193 270 58
50 % 193 270 87
40 % 193 270 108
30 % 193 270 120
Entity #16 | Chains: O
30S RIBOSOMAL PROTEIN S15 protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 193 272 29
95 % 197 277 35
90 % 197 277 39
70 % 197 277 50
50 % 228 402 24
40 % 228 405 34
30 % 228 405 55
Entity #17 | Chains: P
30S RIBOSOMAL PROTEIN S16 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 193 264 38
95 % 193 269 49
90 % 193 269 52
70 % 193 269 62
50 % 193 271 86
40 % 193 271 106
30 % 224 390 63
Entity #18 | Chains: Q
30S RIBOSOMAL PROTEIN S17 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 49 87 235
95 % 192 263 53
90 % 193 267 56
70 % 193 267 66
50 % 193 267 90
40 % 193 267 111
30 % 193 267 123
Entity #19 | Chains: R
30S RIBOSOMAL PROTEIN S18 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 27 51 666
95 % 175 234 62
90 % 175 234 66
70 % 175 234 77
50 % 175 234 103
40 % 175 234 129
30 % 175 234 140
Entity #2 | Chains: X
FRAGMENT OF MESSENGER RNA rna, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #20 | Chains: S
30S RIBOSOMAL PROTEIN S19 protein, length: 93 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 194 272 28
95 % 194 272 40
90 % 194 272 45
70 % 194 272 54
50 % 222 394 28
40 % 222 397 39
30 % 222 397 56
Entity #21 | Chains: T
30S RIBOSOMAL PROTEIN S20 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 22 51 465
95 % 193 268 50
90 % 193 268 53
70 % 193 268 64
50 % 193 268 89
40 % 193 268 110
30 % 193 268 122
Entity #22 | Chains: V
30S RIBOSOMAL PROTEIN THX protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 193 259 42
95 % 193 259 56
90 % 193 259 60
70 % 193 259 69
50 % 193 259 94
40 % 193 259 116
30 % 193 259 129
Entity #3 | Chains: B
30S RIBOSOMAL PROTEIN S2 protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 193 269 31
95 % 193 270 41
90 % 193 270 46
70 % 193 270 55
50 % 221 388 33
40 % 221 391 42
30 % 221 391 61
Entity #4 | Chains: C
30S RIBOSOMAL PROTEIN S3 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 175 233 45
95 % 175 233 63
90 % 175 233 67
70 % 175 233 78
50 % 181 302 80
40 % 181 302 97
30 % 181 302 113
Entity #5 | Chains: D
30S RIBOSOMAL PROTEIN S4 protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 191 262 39
95 % 193 270 42
90 % 193 270 47
70 % 193 270 56
50 % 221 390 30
40 % 221 393 40
30 % 221 393 59
Entity #6 | Chains: E
30S RIBOSOMAL PROTEIN S5 protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 193 269 34
95 % 193 269 46
90 % 193 269 49
70 % 193 269 59
50 % 222 394 29
40 % 222 394 41
30 % 222 396 58
Entity #7 | Chains: F
30S RIBOSOMAL PROTEIN S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 195 274 26
95 % 201 280 33
90 % 201 280 38
70 % 201 280 49
50 % 201 280 84
40 % 201 280 103
30 % 225 334 88
Entity #8 | Chains: G
30S RIBOSOMAL PROTEIN S7 protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 194 273 27
95 % 194 274 38
90 % 194 274 42
70 % 194 274 52
50 % 221 336 65
40 % 221 339 76
30 % 221 339 91
Entity #9 | Chains: H
30S RIBOSOMAL PROTEIN S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 193 269 32
95 % 193 269 43
90 % 194 273 43
70 % 194 273 53
50 % 224 395 26
40 % 225 399 35
30 % 253 504 28

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.