Sequence Similarity Clusters for the Entities in PDB 1HNW

Entity #1 | Chains: A
16S RIBOSOMAL RNA rna, length: 1522 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: I
30S RIBOSOMAL PROTEIN S9 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 49 91 198
95 % 179 256 46
90 % 179 256 51
70 % 179 256 60
50 % 207 356 36
40 % 207 356 46
30 % 228 433 40
Entity #11 | Chains: J
30S RIBOSOMAL PROTEIN S10 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 178 254 36
95 % 179 255 49
90 % 179 255 54
70 % 179 255 64
50 % 213 362 28
40 % 213 362 38
30 % 234 436 36
Entity #12 | Chains: K
30S RIBOSOMAL PROTEIN S11 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 179 256 34
95 % 179 256 45
90 % 179 256 50
70 % 179 256 59
50 % 207 356 35
40 % 230 438 20
30 % 230 439 34
Entity #13 | Chains: L
30S RIBOSOMAL PROTEIN S12 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 125 208 46
95 % 179 263 36
90 % 179 263 41
70 % 207 367 22
50 % 207 368 27
40 % 207 368 37
30 % 207 368 57
Entity #14 | Chains: M
30S RIBOSOMAL PROTEIN S13 protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 179 257 32
95 % 179 257 43
90 % 179 257 48
70 % 179 257 57
50 % 210 361 32
40 % 210 361 43
30 % 231 437 39
Entity #15 | Chains: N
30S RIBOSOMAL PROTEIN S14 protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 179 255 35
95 % 179 255 50
90 % 179 255 55
70 % 179 256 62
50 % 179 256 88
40 % 179 256 108
30 % 179 256 120
Entity #16 | Chains: O
30S RIBOSOMAL PROTEIN S15 protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 179 259 29
95 % 183 264 35
90 % 183 264 40
70 % 183 264 50
50 % 214 369 26
40 % 214 370 36
30 % 214 370 56
Entity #17 | Chains: P
30S RIBOSOMAL PROTEIN S16 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 179 251 37
95 % 179 256 47
90 % 179 256 52
70 % 179 256 61
50 % 179 256 87
40 % 179 257 107
30 % 210 359 63
Entity #18 | Chains: Q
30S RIBOSOMAL PROTEIN S17 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 46 87 225
95 % 178 250 51
90 % 179 254 56
70 % 179 254 66
50 % 179 254 90
40 % 179 254 111
30 % 179 254 123
Entity #19 | Chains: R
30S RIBOSOMAL PROTEIN S18 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 25 51 616
95 % 162 221 64
90 % 162 221 69
70 % 162 221 79
50 % 162 221 111
40 % 162 221 132
30 % 162 221 143
Entity #2 | Chains: X
FRAGMENT OF MESSENGER RNA rna, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #20 | Chains: S
30S RIBOSOMAL PROTEIN S19 protein, length: 93 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 180 259 27
95 % 180 259 38
90 % 180 259 44
70 % 180 259 53
50 % 208 359 31
40 % 208 359 41
30 % 208 359 59
Entity #21 | Chains: T
30S RIBOSOMAL PROTEIN S20 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 20 51 384
95 % 179 255 48
90 % 179 255 53
70 % 179 255 63
50 % 179 255 89
40 % 179 255 110
30 % 179 255 122
Entity #22 | Chains: V
30S RIBOSOMAL PROTEIN THX protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 179 246 39
95 % 179 246 54
90 % 179 246 59
70 % 179 246 69
50 % 179 246 95
40 % 179 246 118
30 % 179 246 131
Entity #3 | Chains: B
30S RIBOSOMAL PROTEIN S2 protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 179 256 30
95 % 179 257 39
90 % 179 257 45
70 % 179 257 54
50 % 207 355 34
40 % 207 356 44
30 % 207 356 62
Entity #4 | Chains: C
30S RIBOSOMAL PROTEIN S3 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 162 220 45
95 % 162 220 65
90 % 162 220 70
70 % 162 220 80
50 % 168 276 78
40 % 168 276 100
30 % 168 276 112
Entity #5 | Chains: D
30S RIBOSOMAL PROTEIN S4 protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 177 249 38
95 % 179 257 40
90 % 179 257 46
70 % 179 257 55
50 % 207 356 33
40 % 207 357 42
30 % 207 357 61
Entity #6 | Chains: E
30S RIBOSOMAL PROTEIN S5 protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 179 256 33
95 % 179 256 44
90 % 179 256 49
70 % 179 256 58
50 % 208 360 30
40 % 208 360 40
30 % 208 362 58
Entity #7 | Chains: F
30S RIBOSOMAL PROTEIN S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 181 261 25
95 % 187 267 34
90 % 187 267 37
70 % 187 267 46
50 % 187 267 84
40 % 187 267 103
30 % 211 313 77
Entity #8 | Chains: G
30S RIBOSOMAL PROTEIN S7 protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 180 260 26
95 % 180 261 37
90 % 180 261 42
70 % 180 261 51
50 % 207 313 54
40 % 207 314 68
30 % 207 314 89
Entity #9 | Chains: H
30S RIBOSOMAL PROTEIN S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 179 256 31
95 % 179 256 42
90 % 180 260 43
70 % 180 260 52
50 % 210 362 29
40 % 211 364 39
30 % 234 443 33

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.