Sequence Similarity Clusters for the Entities in PDB 1HNI

Entity #1 | Chains: A
HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P66) protein, length: 558 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 26 1159
95 % 188 248 88 Flexibility: Medium
Max RMSD: 23.3, Avg RMSD: 4.0
PDBFlex
90 % 188 248 93
70 % 188 248 111
50 % 189 249 147
40 % 189 249 162
30 % 189 249 179
Entity #2 | Chains: B
HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P51) protein, length: 427 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52275
95 % 183 242 112
90 % 183 242 116
70 % 183 242 131
50 % 184 243 154
40 % 184 243 172
30 % 184 243 187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.