Sequence Similarity Clusters for the Entities in PDB 1HMW

Entity #1 | Chains: A
CHONDROITINASE AC protein, length: 700 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 14954
95 % 5 5 14127 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 5 5 13895
70 % 5 5 13040
50 % 5 5 11628
40 % 5 5 10542
30 % 5 5 9201

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures