Sequence Similarity Clusters for the Entities in PDB 1HMW

Entity #1 | Chains: A
CHONDROITINASE AC protein, length: 700 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 14727
95 % 5 5 13926 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 5 5 13700
70 % 5 5 12871
50 % 5 5 11478
40 % 5 5 10416
30 % 5 5 9089

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures