Sequence Similarity Clusters for the Entities in PDB 1HMV

Entity #1 | Chains: A,C,E,G
HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P66) protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 3959
95 % 223 236 106
90 % 223 236 110
70 % 223 236 124
50 % 224 237 149
40 % 224 237 166
30 % 224 237 184
Entity #2 | Chains: B,D,F,H
HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P51) protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 12 2474
95 % 217 230 113
90 % 217 230 117
70 % 217 230 137
50 % 218 231 162
40 % 218 231 178
30 % 218 231 192

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.