Sequence Similarity Clusters for the Entities in PDB 1HMS

Entity #1 | Chains: A
MUSCLE FATTY ACID BINDING PROTEIN protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 14 2317
95 % 11 17 2579 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 11 17 2629
70 % 24 71 508
50 % 26 99 336
40 % 38 210 147
30 % 62 742 22

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.