Sequence Similarity Clusters for the Entities in PDB 1HMS

Entity #1 | Chains: A
MUSCLE FATTY ACID BINDING PROTEIN protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 14478
95 % 11 18 2413 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 11 18 2483
70 % 24 72 554
50 % 25 98 390
40 % 38 212 155
30 % 71 763 22

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures