Sequence Similarity Clusters for the Entities in PDB 1HMR

Entity #1 | Chains: A
MUSCLE FATTY ACID BINDING PROTEIN protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 14 2391
95 % 12 17 2652 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 12 17 2705
70 % 25 71 550
50 % 27 99 366
40 % 41 210 151
30 % 75 750 21

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures