Sequence Similarity Clusters for the Entities in PDB 1HMO

Entity #1 | Chains: A,B,C,D
HEMERYTHRIN protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 9858
95 % 4 4 4304 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 4 4 4332
70 % 5 7 1712
50 % 5 7 1747
40 % 8 10 1579
30 % 8 10 1554

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures