Sequence Similarity Clusters for the Entities in PDB 1HMF

Entity #1 | Chains: A
HIGH MOBILITY GROUP PROTEIN FRAGMENT-B protein, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 13725
95 % 5 6 12942
90 % 5 6 12725
70 % 8 9 7850
50 % 8 9 7219
40 % 13 14 3089
30 % 44 45 1158

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures