Sequence Similarity Clusters for the Entities in PDB 1HMC

Entity #1 | Chains: A,B
HUMAN MACROPHAGE COLONY STIMULATING FACTOR protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 7 1167
95 % 3 7 1587 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 3 7 1619
70 % 3 10 1287
50 % 3 10 1332
40 % 3 10 1340
30 % 3 10 1322

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.