Sequence Similarity Clusters for the Entities in PDB 1HMA

Entity #1 | Chains: A
HMG-D protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 25245
95 % 4 4 7664
90 % 4 4 7613
70 % 4 4 7409
50 % 5 5 6121
40 % 12 14 3182
30 % 45 47 1096

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures