Sequence Similarity Clusters for the Entities in PDB 1HMA

Entity #1 | Chains: A
HMG-D protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 24865
95 % 4 4 7545
90 % 4 4 7493
70 % 4 4 7298
50 % 5 5 6034
40 % 12 14 3138
30 % 45 47 1078

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures